Taking the Initiative

The CFI with it's multidimensional program has set new standards for privately funded research efforts.

The CFI with it’s multidimensional program has set new standards for privately funded research efforts.

From Simmaron to Mt. Sinai to Dr. Montoya’s Stanford group we’ve been more and more blessed with privately funded initiatives on ME/CFS in recent years, but no one is doing it on the scale of the Chronic Fatigue Initiative. Just two years after they showed up on the scene, their biobank is more comprehensive, their epidemiological studies are larger and they are probing more areas than just about anyone.

When the CFI laid out a lunch and used it to go over their results thus far it was not to be missed.

Our Framingham?

“This is the Framingham of ME/CFS” Dr. Komaroff

The Framingham studies having been probing the medical data of the community of Framingham, Massachusetts since 1948. Our understanding of the effects of exercise, diet, aspirin, and smoking on heart disease and stroke came directly out of them. Ongoing studies on dementia, osteoporosis, arthritis, diabetes, eye disease, cancer, and the genetic patterns of many common diseases have continued to yield insights.

Dr. Komaroff called the CFS Biobank, the big CFS database created by the Chronic Fatigue Initiative (CFI), the “Framingham of ME/CFS”. The CFI has collected a multitude of specimens (PBMC, rectal swab, saliva, tears, blood serum and plasma, urine) and epidemiological data (4,000 variables) from rigorously described ME/CFS patients from sites across the United States. They’ve also collected and processed “tremendous amounts of longitudinal data” from the ME/CFS experts. That suggests they’ve been scanning patients records dating back many years into their database.

The CFI and its investigators have been moving fast. Dr. Klimas reported that the five sites and the CFI Biobank squeezed five years of work into just two as they built the Biobank, and completed the first round of studies.

The era of big data is here.

The era of big data is here.

The CFI’s Biobank is a resource for the present, but more importantly it’s a resource for the future. With the samples they’ve banked they should be able to come back when the need arises to quickly assess the validity of future breakthroughs. With patient enrollment being the most expensive part of most studies, the savings from these already-enrolled patients should be substantial.

The CFI has also opened their data up to other researchers. Of course the question is and has been, “if you build it will they come?” The ME/CFS research community affiliated with the CFI has definitely begun building it.

BioBanks Galore

Biobanks are ‘in’ in the Chronic Fatigue Syndrome research community. With the announcement of Montoya’s 200 person biobank, we’re almost swimming in biobanks; there’s the CFIDS Association Biobank, the NIH Biobank, the CFI Biobank, the NSU Biobank, the Peterson/Simmaron Biobank, the WPI’s Biobank, the UK Biobank, and I may be  missing a few. Many are hooked up with sophisticated data capture programs like RedCap which allow for easy data analysis.

A few years ago we didn’t have any, and now we’re crawling with them. You can scratch Biobank’s off the list of the ME/CFS research community’s infrastructure needs.

ME/CFS groups are opening the door for new researchers - and some are stepping through

ME/CFS groups are opening the door for new researchers – and some are stepping through

How much they’re being used is another question. The CFIDS Association’s Biobank appears to be going well with five outside investigators as well as their own investigators using it. One outside investigator (Dr. Houghton) believes he may have found a biomarker and a novel pathogen in a subset of patients. Two more are looking at autoimmunity and antibodies (one to the nervous system and brain including the dorsal root ganglia). That study carries the enticing note that similar autoantibodies have been found in Lyme disease.

Dr. Peterson’s spinal fluid samples from the Simmaron Research Foundation’s Biobank have been used in several studies. (Peterson hung onto his spinal fluid samples for years until he found labs (Columbia, NCNED) he trusted) Except for Simmaron Research’s Tick and Arthropod study, however, the NIH’s Biobank, after its initial usage, appears to have been untouched. Stating that we have samples and we have funding, Executive Director Scott Carlson of the Chronic Fatigue Initiative almost seemed to be imploring investigators to apply for and use the CFI’s specimens.

My guess is that they’ll be used a great deal and will be a great asset as time goes on. The ME/CFS researcher community built it and they will come, and when they do we’ll learn a lot more, faster than we would have if we didn’t have them.

The Chronic Fatigue Initiative Sets Its Priorities

The CFI, funded by the Hutchins Family Foundation, methodically looked at the different possibilities (including sleep, neuroendocrine issues and psychology) and set three areas to focus on: pathogens, immunology, and, in something of a surprise, mitochondria.

  • The Lipkin study did not find pathogens, but may not be the last word in pathogens, after all. He continues his search for bugs in the gut.
  • Immunology – the CFI has gotten more bang for its buck from immunology than pathogens thus far.
  • Mitochondria – The mithave received little sustained research, but which studies in the brain and the muscles suggest could be involved. Later in the conference overviews we’ll check out a poster looking at mitochondrial myopathy patients who had similar exercise findings to ME/CFS patients.

I would’ve put in a plug for a focus on the autonomic nervous system and exercise, but it’s good to see a high-powered research organization digging into the mitochondria.

Epidemiology I: the Big (Big) Study

The people in the CFI’s Biobank aren’t necessarily your typical patients. Dr. Peterson threw his immune subset in there, and other doctors probably included their more severely ill patients. Indeed, all the patients were reported to be severely ill; 99% had PEM and most met the Canadian Criteria.

The vitality scores were extremely low.

The vitality scores were of the ME/CFS patients were three times lower than those obtained from a chronic heart failure study.

Their vitality scores from the SF-36 were alarmingly low — a mere 14.5 compared to 77 for the healthy controls. It’s hard to wrap one’s head around such a low vitality score; to get a sense of how low that score is in the medical arena, the vitality scores of German chronic heart failure patients were 45.6 –three times that of the ME/CFS patients. Their physical functioning score (36) was almost 50% lower than found in heart failure patients (57), and was a third of the the score of healthy controls (95%)

The CFI Biobank clearly contains some very ill patients.

Women Take the Biggest Hits (Again …)

If you’re a woman you’re pretty used to bad news on this blog (:)) and here’s some more: women tended to have more severe cases of ME/CFS and more severe symptoms in every way. Women, unfortunately, don’t appear to be spared anything in this disorder; they have worse fatigue, worse PEM, worse pain — worse everything.

Onset Matters – Somewhat

boxing glove

The type of triggering event may matter – somewhat

It appears that onset matters; the more ‘acute’ the onset; i.e., the more rapidly it comes on, the more inflammatory symptoms you are likely to have. It makes sense that an acute infectious onset might produce more inflammatory symptoms (presumably symptoms like fever, lymph node enlargement, muscle aches, headaches). On the other hand acute onset was linked to more severe disease (i.e., more severe early symptoms predicted longer disease duration).

The finding that people who had been ill for shorter periods of time have more autonomic symptoms suggested that autonomic issues tend to get a bit better over time.

The finding that cognitive complaints were as troubling as fatigue was rather stunning given the incredible fatigue present in this disorder. It suggests a) the cognitive studies, which generally find ‘mild’ abnormalities, are missing something (as one Japanese study suggested) or b) the cognitive studies do not include this subset of patients, and c) understanding the neuro-cognitive manifestations of this disorder is critical.

Factor Analysis Plucks Out Groups

A factor analysis plucked out, if I understand it right, subsets of patients with similar ‘factors’. The top factors are the most prevalent and important in the patients and the bottom show up less and with reduced severity.

Sensitivity to stimuli suggested that neuroinflammation was common in this group.

Sensitivity to stimuli suggested that neuroinflammation was common in this group.

It wasn’t surprising to see fatigue, sleep and post-exertional malaise show up as the top factors, but seeing a ‘neuroinflammatory’ subset (sensitivity to noise, light, etc.) with tender lymph nodes (immune!) and chemical sensitivities was new, but perhaps not surprising given the sensory issues that commonly show up in the more severely ill patients. This factor brings to mind Marco’s sensory gating blog from his Neuroinflammatory Series, which suggested that sensory symptoms, not fatigue, might provide a better clue to what’s going on in ME/CFS.

The gut also scored very high as a factor in this group of patients, with 70% having prominent gut symptoms. Much has been made of Chronic Fatigue Syndrome as being another chronic pain disorder, and pain/Fibromyalgia was another prominent factor.

Neuroinflammation showed up in spades, but an immune set with low-grade fever, crimson crescents on their throats, swollen lymph nodes, and increased serological findings (antibodies) showed up much further down (at position eight). The classic immune/viral reactivated subset of patients may be smaller than the neuroinflammatory subset. Much further down on the list of important factors (#12) was anxiety and depression, both of which certainly resulted from the illness (instead of vice versa).

Epidemiology II: the (Un)Natural History of Chronic Fatigue Syndrome or..the ‘Oldies’ Study

This fascinating study put a special emphasis on those who’ve had ME/CFS for over seven years. With the average duration of illness at 16 years they were ‘mature’ ME/CFS patients.

In ME/CFS patients who'd died cancer rates were  four times the national average. Could low natural killer cell functioning be involved?

In ME/CFS patients who’d died cancer rates were four times the national average. Could low natural killer cell functioning be involved?

The study found that significantly more people from Dr. Peterson’s practice had died. This could be bad news for one of our top doctors, except for the fact that he went back the furthest in time and easily had the most long-timers in his practice. That says something for staying put in one place – in what was for many THE place where it all started – Incline Village. (By the way, while I was up at Incline with Corinne I heard some stories of the abuse Dr. Peterson sustained when Incline Village became known for ME/CFS in the early days. Incline was not a pleasant place for a doctor treating Chronic Fatigue Syndrome patients in the early to mid 1980’s.)

For the most part, as we’ve heard before, people improved somewhat over time, but if I got my notes right 37% of the deceased patients (four times the national rate) had cancer, which is not particularly good news but could fit given the natural killer cell problems in ME/CFS. Nineteen percent had heart disease and nineteen percent had committed suicide.

Nobody said, to may hearing anyway, that people with ME/CFS were dying earlier than normal.

Onset Matters Again – Somewhat

Sudden onset did not, in this study, affect how sick a person was, what other disorders they had, or their initial symptoms (other than much high post-exertional malaise). While the type of onset was not particularly determinative, symptom severity at the onset of ME/CFS was: people who were sickest right off the bat tended to stay the sickest.

With the Dubbo studies, and, if memory serves, another study, finding that symptom severity differentiated those who came down with ME/CFS and those who didn’t after an infection, this finding is starting to get very real. It suggests that something very important – something determinative – whether it’s an immune reshuffle, a deeply penetrating pathogen or something else, happens very early in the illness.

Interlude – A Huge Study Begins

The Dubbo and Taylor studies (tracking the effects of post-infectious illness beginning not long after the disease process started) have been very helpful, but because they caught the disease in the act after it started, the question of why someone came down with ME/CFS never got answered. Yes, we know that symptom severity is important, and the Dubbo studies indicated that cytokine levels early in the disease were important, but we don’t know why a particular healthy person got so sick and had such a strong immune response to the pathogen.


Lenny Jason hopes to enroll the entire freshman class of Northwestern in his study

That’s where Lenny Jason’s 6,000 person (that’s not a misprint!) Northwestern University study comes in.  Jason’s goal in this three-year study is to enroll every freshman at Northwestern University, take a sample of their blood, watch them as approximately 10% develop infectious mononucleosis (!) , then take their blood again and follow them for at least a year.  Jason hopes to be able to go back to those original samples and, much as Apkarian did with his brain images, determine the flaw — the fly in the ointment, so to speak — which set up these youngsters first for infectious mononucleosis and then for ME/CFS.

Finding a culprit in their system could, of course, result in being able to target young people at risk and then apply the appropriate treatments (presumably antivirals) before ME/CFS gets established in order to snuff out the infection proactively. It might also illuminate what needs to be fixed in post-infectious ME/CFS cases.

How will Jason get all of those freshman enrolled? He’s giving them $100 just to draw a little blood. A hundred dollars is such an incentive to the freshman mind that some are enrolling with the misconception that they’ll get infected with IM (:)). (They’re just giving blood.) The study just began, and he said it’s going quite well.

Remission, Remission, Remission

Perhaps the most fascinating statistic was that a full thirty percent of these very ill and very long duration patients had had at least one remission lasting a year, and the average number of remissions for this group was 2.5. The next step, hopefully, will be to try and understand what caused the remissions, and then what triggered a relapse.

Mady Hornig and the Pathogen Study

I hope this will soon be an annual meeting – Mady Hornig

Dr. Hornig is optimistic about the future of ME/CFS research.  She started off her presentation expressing her hope that the IACFS/ME meeting will soon be an annual one.  She followed that statement up in discussion by stating that she believes ME/CFS may very well follow autism’s path. Five years ago a couple of autism studies were published weekly. Now dozens are completed daily.

arrow going up

If Mady Hornig’s right we’re due for a big increase in ME/CFS studies over the next five years or so

The pathogen study elicited a great deal of interest but much more is on the way from the Columbia group. A 50 person fecal sample (microbiome)/immunological profiling study is fully funded and underway. Being able to  associate  immune abnormalities with gut flora abnormalities would put a laser-like focus on the gut and using gut rehabilitation to improve immune functioning.

She believes the gut studies may very well allow them to cull out subsets. The results shouldn’t take that long. The fecal samples were, uh, ‘packed’ and ready to go into the ‘fecal analysis sampler’ which was, er…backed up with other specimens.  Everything should go though quickly once they’re pushed through.  (:)) My sense was that it would be months rather than years before they got the results.

Trying to remain somewhat humble (but failing) she said she has a good sense about what’s going in complex diseases and she is very confident the CFI’s gut studies will be significant. In fact, when I asked  her what if the metabolomics study didn’t find anything she said, looking at me  like “Are you kidding?” there was  no way they were  not going to find anything. (The metabolomics study will analyse metabolites created by the gut that are found in the blood.)

Hornig, by the way, just published a review titled The role of microbes and autoimmunity in the pathogenesis of neuropsychiatric illness which states that the microbiome can determine how effectively we fight off pathogens and toxins and our central nervous system  function.

“Growing evidence suggests that the microbiome conditions host immunity to microbes and xenobiotics, and regulates autoimmune responses that can affect the central nervous system (CNS)”

Other studies underway include an immunoplex and a proteomics study.

Thanks to the Hutchins Foundation

We’re indebted to whoever is behind the Hutchin Family Foundation’s focus on ME/CFS.  The Foundation came out of nowhere to fund what was easily largest private effort ever on ME/CFS.  They recruited top researchers and physicians and have built the most comprehensive biobank/database ever assembled on this disease. 

They’re not alone. We know that big donors have  played a major role in the Stanford and Mt. Sinai centers and others. My guess is that there are many more Hutchins Family Foundations out there and as this disorder becomes more well known and better understood, more will pop up. 

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